CDS

Accession Number TCMCG016C17775
gbkey CDS
Protein Id OMO70520.1
Location join(73258..73453,73578..73830,74041..74197,74298..74595,74703..74917,75024..75122,75914..76100,77236..77711,77818..78112,78199..78443,80837..81010,81296..81599,81745..81821,82088..82169,83465..84239,84810..84882)
Organism Corchorus capsularis
locus_tag CCACVL1_18857

Protein

Length 1301aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01011794.1
Definition Zinc finger, C6HC-type [Corchorus capsularis]
Locus_tag CCACVL1_18857

EGGNOG-MAPPER Annotation

COG_category O
Description E3 ubiquitin-protein ligase
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K11975        [VIEW IN KEGG]
EC 2.3.2.31        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000151        [VIEW IN EMBL-EBI]
GO:0000209        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0004842        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005739        [VIEW IN EMBL-EBI]
GO:0005740        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009896        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010941        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019787        [VIEW IN EMBL-EBI]
GO:0019899        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0030162        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031331        [VIEW IN EMBL-EBI]
GO:0031624        [VIEW IN EMBL-EBI]
GO:0031966        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032434        [VIEW IN EMBL-EBI]
GO:0032436        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042176        [VIEW IN EMBL-EBI]
GO:0042981        [VIEW IN EMBL-EBI]
GO:0043066        [VIEW IN EMBL-EBI]
GO:0043067        [VIEW IN EMBL-EBI]
GO:0043069        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044390        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044429        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045732        [VIEW IN EMBL-EBI]
GO:0045862        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0060548        [VIEW IN EMBL-EBI]
GO:0061136        [VIEW IN EMBL-EBI]
GO:0061630        [VIEW IN EMBL-EBI]
GO:0061659        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901800        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1903050        [VIEW IN EMBL-EBI]
GO:1903052        [VIEW IN EMBL-EBI]
GO:1903362        [VIEW IN EMBL-EBI]
GO:1903364        [VIEW IN EMBL-EBI]
GO:1990234        [VIEW IN EMBL-EBI]
GO:2000058        [VIEW IN EMBL-EBI]
GO:2000060        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCGACAGAAATGACATTTGATCAATTAATGTATGGAGTTATGAAGGAAGACGAGGATTTGGAGCTCTCTTCTGCCACTTTTGCAATTATTAACAGTGATTCATCATCATCATCGACACCAGAAGCAATTCTTTCGTCTGGTTCTGATTTATCTCCGGAAGAAGAGTTGCAGGAACAGGAAGAGTTAGAGAGAGCTTTTGACTTTAACGAGCCTGTCCAAGAGCTTAATTGTCGTGACCTAAAGTGGAGCGATTTGGTTGAGTTAGAAACAGGGGAAGCCCAGAGTACTTCAGGACTTCGTTGCAATGAGAAACAGAGGATTATCTCGGATGAGAAAGGAAGAGAAATTTTCATGTCGAGGAAACCAAGAAAGAGGGGATCATCGAGACATTCTCACTCCAAACTCAATGCAAGAAGGATGGGACATGCTCCACAAATCTCTTCCAGGAATGAATGTCACGCTAAAACGAGTTCAACTACAGCAACTGCTCAGATTGTTGGTAATTGGAAAGGTTTAAAAGATAATGCAAGAGATCATCAAATCGTTTGGCCTCCCATGGTTGTCATTATGAACACAATGACAAACATTTGTAAGAACGGAAAGTGGCTTGGCATGGGAAGCCGAGAGCTTCTGGAGCTCTTCAGTTCGTATCCTGCAATGAAGGCTGAACATTCCTATGGCCCTCATGGTCACCGCGGTATAAGTGTGTTGGTTTTTGAGAGCTCAGCAGTGGGCTATTTGGAGGCTGAGCGTTTGCATAAGGATTTTGTGGAGCAAGGATTTGATAGATTTGCTTGGAATAATTCTGGTTCAAACGTAATGGTGCCAGGAGGAGAGCGTCAACTTTATGGTTTCATGGCAATGAAGGGAGACCTCGATATTTTCAACCAGCATTGCCAAGGCAAATCAAAGATCAAATATGAGGTGAAATCATATGAAGATGCAGTTCTTAAAGAAATCAAGAAAATGAGAGAACAGGTTGCAGAAGAAAGAAAAGTTGTAAAAACTCTTCAAGGATCACTTTATAATATGAGTAGGAACCTGCACCGGGAAATGAATGACATCCAGATATTTAAACGGAGAGTCCAATCACTGCATAAAGAACACAAGGAAGAGATGGACTGCCAGGAAAACTTTTACAAGGACCAACTCAAAATCAAAGAGGCCAAGGTGAAAGAGCTTGAGAGCTGGTGGAAATGGAATATGATGCAGATGCTTTTGACTTTGACGATCGAGCCTGTCCAAGAGCTCGAAGATTGTTTTGAAGCATTGGGGAAACCTGAATGTCGTGTCTGCCATAGATTGTGTTGCAGGGAATGTAGTATCCCCAAGGGTCCAGGGCTTAATTGTCGTGACCTAAAGTGGAGCGATTTGGTTGAGTTAGAAACAGGGGAAGCCCAGAGAAGCTCAAACATTGAAGACGATTCCAAGGGAAAAGGCATAGCAATGGATGATGATGAGGAGTTTGATTGTGATACAAGTCAAAAGAGCCATGAAACTCGCAAGAAGAGTAAATGGTTTGAGGAATTTTTTGAGAGAATGGATCGTCTGAACATTGAGGAAATGGGCAAAAGCGTGTGGCATTGTCCAGCATGCCAAGGAGGTCTTGGTGCCACCAAATGGTACAGCACCCAGGATTTGATACAACATTCCAACAAGGAAGAAGCAAGAAGAATGAAGGCACACAGGGAACTCGCAGGGCTTCTAGAGGAAGAACTGCGTAGGAAAGGAAATTCAACTACAGCAACTCCTACAACTTCTCAGAATATTGCTGGTAATTGGAAAGGTTTAAAAGATGATGCAAGAGATCATCAAATCATTTGGCCTCCCATGGTTATCATTATGAACACAATGACAAGCATTTATGAGGATGGAAAGTGGCTTGGCATGGGAAGCCGAGAGCTTCTGGAGCTCTTCAGCTCGTATCCTGCTATAGAGGCTCAACATTCCTATGGCCCTGAAGGTCACCGTGGTATAAGTGTGTTGGTTTTTGAGAGCTCGGCAGTGGGCTATTTGGAGGCTGAGCGTTTGCATAAGGATTTTATGGAGCAAGGGTTGGATAGATTTGCTTGGAATTCTTGTTCAGACATGATCCTTCCGAAAGGAGAGCGTCAACTTTACGGTTTCATGGCAGAGAAGGGAGACCTTGATATTTTCAACCAGCATTGCCAAGGCAAATCAAAGATCAAATATGAGCTGAAATCATATGAAGAAGTAGTTCTTAGAGAAATCAAGAAAATGAGAGAGGATAGCCAACGGCTTCCATGGTTGAAAGTCATGCTTACAGAAGAAAGAAAAGTTGTAAAAACTCTTCAAGGATCACTTTATGACATGGGTAGGAAGCTGCAGCGGAAAATGAATGACATCCAGATATTTAAACGGAGAGTCCAATCACTGCGTAAAGAACACAAGGAAGAGATAAACAAGAGAGGGATCCTTACAGCTTTGTTCCTCACAAACTCATCCAAGCAATTCAACGAAAATGAGGAGAACATGGAGGCAACCCAGGCAGAGAAATCAGATGAGGGAACTCTCAGTTTCCTTCCAATCAAACAACCCGCCTCAAATTCAAACTTCTTGTTCCCACAATTGTGGCTTGGCATGGGAAGCCGAGAGCTTCTGGAGCTCTTCAGTTGGTATCCTGCTATGAAGGCTGAGCATTCCTATGGCCCTCATGGTCACCGCGGTATAAGTGTCTTGGTTTTTGAAAGCTCAGCAGTGGCCTATTTGGAGGCTGAGCGTCTGCATAAGGATTTTGTGGAGCAAGGATTGGGTAGATTTGCTTGGAATAATTCTCGTTCAAAAGTAATCGTGCCAGCCCCAGGAGGAGAGCGTCAACTTTATGGTTTCTTGGCAATGAAGGGAGACCTCGATATTTTCAACCACCATTGCCAAGGCAAATCAAAGATCAAATATGAGGTGAAATCATATGAAGAGGCAGTTCTCAAAGAAATCAAGAAAATGAGAGAACAGATGGACTCCCAGGAAAACTTTTACAAGGACCAAAACAAAACCAATGAGGCCAAGGTGAAAGAGCTTGAGAGTTGGAAAAGGACATTCTTTGATCGAAATGAAGAAGAAATCTTTCCTCCTTTTGATGGAAAGTATGCTGAAGAGTTACAGTTTCAAGAGGCTCTCATGTCATCTGCAATCTCTTTAGAAACCAGAAACAACATTTCTAATCCATTTATCTACCATGCTTCTTCTTCAGCTTTAATCCAAGCCATGCCTCAGCCAGAGTTAGTGGAGACTGAAACGAAAGGGCAAGGTGAATCCTCGTTAAGCTTCTGTGAGATTTGTGTTGAAAGGAAAGAAACTGATCAAATGTTCAAAACTGAAAGCTGCGTTCACTCTTACTGTGTTGATTGCATCGGTAAGCATGTTTTCACTAGGGTTGAAGAAAGCATAACAATTATAACATGCCCTGGGGTGAATTGCAAGGCTGTGTTGGAACTTGATGCTTGTAGGCCTTTGCTTCCTGAAATTGTAATCCATAGTTGGGAAGATGCTCTCTGCCAAGAGTTTATCAATGGATCTCTGAGATTTTATTGTCCTTTTAGGGATTGTTCAGCGCCATTGCTAAAGGATGATGGAGGAGAAGTTATTAGAGAATCTGAGTGCCCTTTTTGCCATAGATTGTTCTGTGTGCAGTGCTCTGTGCCATGGCATTCAGGGATCAATTGTGAGGATTTCCAGAGGCTTAATGAGGATGAGAGAGGAAGGGAAGATCTCATGGTGAGGGAACTTGCCAAGGAGAAAAAATGGGCTAGGTGCCCTAAATGCAATTTTTATGTGGAAAGAACAGAAGGATGTCCACATATGATTTGCAGGTGCAATTTCGAGTTTTGTTATGGCTGCGAAGAAGAATGGACTGGGAATCATGGTGGCTGCACGAGGGATTAA
Protein:  
MATEMTFDQLMYGVMKEDEDLELSSATFAIINSDSSSSSTPEAILSSGSDLSPEEELQEQEELERAFDFNEPVQELNCRDLKWSDLVELETGEAQSTSGLRCNEKQRIISDEKGREIFMSRKPRKRGSSRHSHSKLNARRMGHAPQISSRNECHAKTSSTTATAQIVGNWKGLKDNARDHQIVWPPMVVIMNTMTNICKNGKWLGMGSRELLELFSSYPAMKAEHSYGPHGHRGISVLVFESSAVGYLEAERLHKDFVEQGFDRFAWNNSGSNVMVPGGERQLYGFMAMKGDLDIFNQHCQGKSKIKYEVKSYEDAVLKEIKKMREQVAEERKVVKTLQGSLYNMSRNLHREMNDIQIFKRRVQSLHKEHKEEMDCQENFYKDQLKIKEAKVKELESWWKWNMMQMLLTLTIEPVQELEDCFEALGKPECRVCHRLCCRECSIPKGPGLNCRDLKWSDLVELETGEAQRSSNIEDDSKGKGIAMDDDEEFDCDTSQKSHETRKKSKWFEEFFERMDRLNIEEMGKSVWHCPACQGGLGATKWYSTQDLIQHSNKEEARRMKAHRELAGLLEEELRRKGNSTTATPTTSQNIAGNWKGLKDDARDHQIIWPPMVIIMNTMTSIYEDGKWLGMGSRELLELFSSYPAIEAQHSYGPEGHRGISVLVFESSAVGYLEAERLHKDFMEQGLDRFAWNSCSDMILPKGERQLYGFMAEKGDLDIFNQHCQGKSKIKYELKSYEEVVLREIKKMREDSQRLPWLKVMLTEERKVVKTLQGSLYDMGRKLQRKMNDIQIFKRRVQSLRKEHKEEINKRGILTALFLTNSSKQFNENEENMEATQAEKSDEGTLSFLPIKQPASNSNFLFPQLWLGMGSRELLELFSWYPAMKAEHSYGPHGHRGISVLVFESSAVAYLEAERLHKDFVEQGLGRFAWNNSRSKVIVPAPGGERQLYGFLAMKGDLDIFNHHCQGKSKIKYEVKSYEEAVLKEIKKMREQMDSQENFYKDQNKTNEAKVKELESWKRTFFDRNEEEIFPPFDGKYAEELQFQEALMSSAISLETRNNISNPFIYHASSSALIQAMPQPELVETETKGQGESSLSFCEICVERKETDQMFKTESCVHSYCVDCIGKHVFTRVEESITIITCPGVNCKAVLELDACRPLLPEIVIHSWEDALCQEFINGSLRFYCPFRDCSAPLLKDDGGEVIRESECPFCHRLFCVQCSVPWHSGINCEDFQRLNEDERGREDLMVRELAKEKKWARCPKCNFYVERTEGCPHMICRCNFEFCYGCEEEWTGNHGGCTRD